Slot: track_geometry¶

Geometric properties of the sequence features in the genomic annotation file if considered as an one-dimensional genome browser track (also relevant for non-visual analyses).

URI: https://w3id.org/fga-wg/schema/bundle/track_geometry

Applicable Classes¶

Name	Description	Modifies Slot
GenomicAnnotationFile	Information about a genomic annotation / track file. GenomicAnnotationFile is a specification of the File entity and inherits all the fields defined in File, in addition to the fields that are specific to GenomicAnnotationFile, as detailed here.	no

Properties¶

Type and Range¶

Property	Value
Range	TrackGeometry
Domain Of	GenomicAnnotationFile

Cardinality and Requirements¶

Property	Value
Required	Yes

Examples¶

Value
None

Identifier and Mapping Information¶

Schema Source¶

from schema: https://w3id.org/fga-wg/schema/bundle

Mappings¶

Mapping Type	Mapped Value
self	https://w3id.org/fga-wg/schema/bundle/track_geometry
native	https://w3id.org/fga-wg/schema/bundle/track_geometry

LinkML Source¶

name: track_geometry
description: Geometric properties of the sequence features in the genomic annotation
  file if considered as an one-dimensional genome browser track (also relevant for
  non-visual analyses).
examples:
- object:
    elements_circular: false
    elements_overlapping: false
    has_edges: false
    has_gaps: true
    has_lengths: true
    has_names: true
    has_strands: false
    has_values: true
    lengths_constant: false
    value_type: multiple
from_schema: https://w3id.org/fga-wg/schema/bundle
rank: 1000
domain_of:
- GenomicAnnotationFile
range: TrackGeometry
required: true