Slot: has_gaps¶

Whether there are gaps between the sequence features (there exists at least one gap between two features on the same sequence).

URI: https://w3id.org/fga-wg/schema/bundle/has_gaps

Applicable Classes¶

Name	Description	Modifies Slot
TrackGeometry	Overall geometric properties of the sequence features in the genomic annotation file if considered as an one-dimensional genome browser track, in line with the track type delineations from Gundersen et. al, 2011. While conceptually based on visual characteristics, these properties are also useful to e.g. select relevant annotation files for non-visual analyses.	no

Properties¶

Type and Range¶

Property	Value
Range	Boolean
Domain Of	TrackGeometry

Cardinality and Requirements¶

Property	Value
Required	Yes

Examples¶

Value
True

Identifier and Mapping Information¶

Schema Source¶

from schema: https://w3id.org/fga-wg/schema/bundle

Mappings¶

Mapping Type	Mapped Value
self	https://w3id.org/fga-wg/schema/bundle/has_gaps
native	https://w3id.org/fga-wg/schema/bundle/has_gaps

LinkML Source¶

name: has_gaps
description: Whether there are gaps between the sequence features (there exists at
  least one gap between two features on the same sequence).
examples:
- value: 'True'
from_schema: https://w3id.org/fga-wg/schema/bundle
rank: 1000
domain_of:
- TrackGeometry
range: boolean
required: true